PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0002s0085.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 330aa    MW: 36463.6 Da    PI: 5.4781
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0002s0085.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1062.1e-3346100155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          k+rlrWt++LH+rFveav+qLGG+++AtPk +l++m+v gLt++hvkSHLQkYRl
  Kalax.0002s0085.2.p  46 KQRLRWTNDLHDRFVEAVAQLGGPDRATPKGVLRVMGVSGLTIYHVKSHLQKYRL 100
                          79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.90843103IPR017930Myb domain
SuperFamilySSF466891.43E-1745100IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.4E-3245101IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-2646101IPR006447Myb domain, plants
PfamPF002495.2E-94899IPR001005SANT/Myb domain
PfamPF143791.8E-23131177IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MRATPLDLAS EKSSAQGKPS HGRESNMEPG GGDSNNQSSN PNLASKQRLR WTNDLHDRFV  60
EAVAQLGGPD RATPKGVLRV MGVSGLTIYH VKSHLQKYRL AKYLPDSSSD GKVENKESGD  120
TGSSQDGSAG MQITEALKLQ MEVQKRLHEQ LEVQRQLQLR IEAQGKYLKK IIEEQQRLGV  180
FTLEEDPAPA TDIPQSNNSK IDSAGPGPAS RFSLEDKSKN LFTDIRHFVD EAFPYLQEPL  240
TPDSACDRNS PTESLKDDQP FKKQRLSVNM NEPFDRPENE VSPQMVEGLT PLHQQPSSGP  300
FTQLQFDLTP GISVRDEDRA EKLPGGSYL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010647087.11e-110PREDICTED: protein PHR1-LIKE 1-like isoform X1
RefseqXP_010647086.11e-110PREDICTED: protein PHR1-LIKE 1-like isoform X1
RefseqXP_010647085.11e-110PREDICTED: protein PHR1-LIKE 1-like isoform X1
RefseqXP_002272588.21e-110PREDICTED: protein PHR1-LIKE 1-like isoform X1
TrEMBLF6HD661e-110F6HD66_VITVI; Putative uncharacterized protein
STRINGVIT_00s0475g00040.t011e-110(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-80G2-like family protein